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Arctic3D run ID: example-P01584-095

If you use Arctic3D in your research, please cite:

  1. R.V. Honorato, P.I. Koukos, B. Jimenez-Garcia, A. Tsaregorodtsev, M. Verlato, A. Giachetti, A. Rosato and A.M.J.J. Bonvin. "Structural biology in the clouds: The WeNMR-EOSC Ecosystem." Frontiers Mol. Biosci. (2021) 10.3389/fmolb.2021.729513

  2. M. Giulini, R.V. Honorato, J.L. Rivera and A.M.J.J Bonvin. ARCTIC-3D: automatic retrieval and clustering of interfaces in complexes from 3D structural information. Commun Biol 7, 49 (2024). 10.1038/s42003-023-05718-w

Arctic3D is an open source tool available to the community at its GitHub repository

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Dendrogram

Rank Resnum Resname Prob
1 148 GLN 0.615
2 120 ARG 0.538
3 127 ARG 0.538
4 131 GLN 0.538
5 141 GLU 0.538
6 143 LYS 0.538
7 146 HIS 0.538
8 147 LEU 0.538
9 151 ASP 0.538
10 162 PHE 0.538
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Rank Resnum Resname Prob
1 139 PRO 1.0
2 180 GLU 1.0
3 181 LYS 1.0
4 182 ASN 1.0
5 202 ASP 1.0
6 203 PRO 1.0
7 140 TYR 0.5
8 183 LEU 0.5
9 198 LEU 0.5
10 200 SER 0.5
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Rank Resnum Resname Prob
1 188 VAL 1.0
2 189 LEU 1.0
3 212 GLU 1.0
4 214 ARG 1.0
5 190 LYS 0.5
6 191 ASP 0.5
7 197 GLN 0.5
8 199 GLU 0.5
9 200 SER 0.5
10 202 ASP 0.5
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Rank Resnum Resname Prob
1 130 GLN 1.0
2 242 GLN 1.0
3 256 GLY 1.0
4 257 GLN 1.0
5 170 ASP 0.6
6 220 ILE 0.6
7 222 ILE 0.6
8 223 ASN 0.6
9 225 LYS 0.6
10 227 GLU 0.6
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This work is co-funded by the Horizon 2020 projects EOSC-hub and EGI-ACE (grant numbers 777536 and 101017567), BioExcel (grant numbers 823830 and 675728)
and by a computing grant from NWO-ENW (project number 2019.053).