Welcome to the Utrecht Biomolecular Interaction Web Portal >>

Your ProABC-2 prediction (ExampleProABC2) has finished successfully.

Please note that the results will be deleted after two weeks.

To cite ProABC-2, please refer to:

  1. F. Ambrosetti, T.H. Olsen, P.P. Olimpieri, B. Jiménez-García, E. Milanetti, P. Marcatilli, A.M.J.J. Bonvin. "proABC-2: PRediction Of AntiBody Contacts v2 and its application to information-driven docking", Bioinformatics, , btaa644, https://doi.org/10.1093/bioinformatics/btaa644
  2. R.V. Honorato, P.I. Koukos, B. Jimenez-Garcia, A. Tsaregorodtsev, M. Verlato, A. Giachetti, A. Rosato and A.M.J.J. Bonvin (2021). "Structural biology in the clouds: The WeNMR-EOSC Ecosystem." Frontiers Mol. Biosci., 8, https://doi.org/10.3389/fmolb.2021.729513

For more information about the predictive model please check the ProABC-2 prediction method page.

Further information can be found in the ProABC-2 Manual and an example of the ProABC-2 output can be found here.

Back to ProABC-2 home page

How would you rate your experience with our portal? sentiment_very_dissatisfied sentiment_dissatisfied sentiment_neutral sentiment_satisfied sentiment_very_satisfied

Prediction details

Chain predictions
Heavy chain: heavy-pred.csv
Heavy chain sequence: EVQLVESGGGLVQPGGSLRLSCAASGYTFTNYGMNWVRQAPGKGLEWVGWINTYTGEPTYAADFKRRFTFSLDTSKSTAY LQMNSLRAEDTAVYYCAKYPHYYGSSHWYFDVWGQGTLVTVSS
Calculated features:
H1_len H2_len H3_len H1_can H2_can H3_can Germline
7 4 12 1 2 bulged IGHV9-Mus
Light chain: light-pred.csv
Light chain sequence: DIQMTQSPSSLSASVGDRVTITCSASQDISNYLNWYQQKPGKAPKVLIYFTSSLHSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYSTVPWTFGQGTKVEIKRTV
Calculated features:
L1_len L2_len L3_len L1_can L2_can L3_can Germline
7 3 6 2 1 1 IGKV1-Homo
Proudly powered by:
EOSC-hub
EOSC
BioExcel
EGI
EGI-ACE
NWO
This work is co-funded by the Horizon 2020 projects EOSC-hub and EGI-ACE (grant numbers 777536 and 101017567), BioExcel (grant numbers 823830 and 675728)
and by a computing grant from NWO-ENW (project number 2019.053).